Biddy BA, Kong W, Kamimoto K, Guo G, Waye SE, Sun T, Morris SA. Single-cell mapping of lineage and identity in direct reprogramming. Nature. 2018.

CellTagging: Single-cell mapping of lineage and identity in direct reprogramming.

Biddy BA, Kong W, Kamimoto K, Guo G, Waye SE, Sun T, Morris SA. Single-cell mapping of lineage and identity in direct reprogramming. Nature. 2018. Dec 13; 564(7735):219-224. doi: 10.1038/s41586-018-0744-4.

CellTag Viz

Clones and lineages can be interactively explored at: http://celltag.org/

CellTagging constructs

CellTagging constructs are available from Addgene: https://www.addgene.org/pooled-library/morris-lab-celltag/

CellTagging protocols

Working CellTagging protocols are available via protocols.io: dx.doi.org/10.17504/protocols.io.vawe2fe

CellTag code and analysis tutorials

CellTag code and analysis tutorials are available via GitHub: https://github.com/morris-lab/CellTagWorkflow

Single-cell RNA-seq data from Biddy et al., Nature, 2018

GEO Series: GSE99915. Platforms: Drop-seq and 10x Genomics: This dataset consists of 10 Drop-seq libraries and 18 10x Genomics libraries, including 4 biological replicates of reprogramming timecourse experiments.